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Mystery and Paradox of God's Nature in Scripture

The nature of God is frequently presented in Scripture as a profound mystery, exceeding human comprehension and full of paradoxes. The book of Job directly poses this question: "Can you fathom the mystery of God? Or can you probe the limits of the Almighty?" [3]. This highlights the unsearchable and infinite wisdom of God, which is beyond human understanding [2, 7, 15].

The term "mystery" in biblical contexts often refers not to something unknowable, but to a truth previously hidden that has now been revealed [4, 14]. For instance, the calling of the Gentiles into the Christian Church is described as a mystery made manifest through revelation [4, 11, 12, 13]. Similarly, the resurrection of the dead and other doctrines that finite intelligence cannot fully grasp are termed mysteries [4].

One of the greatest mysteries of godliness is the incarnation of Christ: "God was manifest in the flesh, justified in the Spirit, seen of angels, preached unto the Gentiles, believed on in the world, received up into glory" [5, 9]. John Gill describes this as a "great mystery," involving the union of divine and human natures in Christ, which, though revealed, cannot be fully accounted for by human reason [10]. This mystery is central to Christian faith, encouraging both internal and external piety [10].

The paradoxes within God's nature and actions are also evident. For example, the efficacy of prayer presents a mystery, as Scripture does not offer a theoretical explanation for how human prayer interacts with God's unalterable general laws or human free will [1]. God's wisdom is described as perfect, mighty, universal, infinite, and unsearchable, yet it is also the source from which all human wisdom is derived [2]. The Bible also speaks of God creating darkness and light, and the inexplicable nature of darkness itself is noted, exhibiting God's power and greatness [6].

The concept of God's foreknowledge is another attribute whose full import is beyond human comprehension, even though His knowledge is infinite [8]. Proverbs 25:2 states, "The glory of God is to conceal a thing secret: but the King's honour is to search out a thing" [11, Geneva1599]. This verse suggests a divine prerogative to hold certain truths in mystery, while also encouraging human inquiry into what has been revealed.

Sources

  1. Smith's Bible Dictionary “Smith's Bible Dictionary: Prayer — The object of this article will be to touch briefly on-- + The doctrine of Scripture as to the nature and efficacy of prayer; + Its directions as to time, place and manner of prayer; + Its types and examples of prayer. + Scripture does not give any theoretical explanation of the mystery which attaches to prayer. The difficulty of understanding real efficacy arises chiefly from two sources: from the belief that man lives under general laws, which in all cases must be fulfilled unalterably; and the opposing belief that he is master of his own destiny, and need ”
  2. Torrey's Topical Textbook “Torrey's Topical Textbook: Wisdom of God, The — Is one of his attributes -- 1Sa 2:3; Job 9:4. Described as Perfect. -- Job 36:4; 37:16. Mighty. -- Job 36:5. Universal. -- Job 28:24; Da 2:22; Ac 15:18. Infinite. -- Ps 147:5; Ro 11:33. Unsearchable. -- Isa 40:28; Ro 11:33. Wonderful. -- Ps 139:6. Beyond human comprehension. -- Ps 139:6. Incomparable. -- Isa 44:7; Jer 10:7. Underived. -- Job 21:22; Isa 40:14. The gospel contains treasures of -- 1Co 2:7. Wisdom of saints is derived from -- Ezr 7:25. All human wisdom derived from -- Da 2:1. Saints ascribe to him -- Da 2:20. Exhibited in His works. ”
  3. Job ““Can you fathom the mystery of God? Or can you probe the limits of the Almighty? -- Job 11:7”
  4. Easton's Bible Dictionary “Easton's Bible Dictionary: Mystery — The calling of the Gentiles into the Christian Church, so designated (Eph. 1:9, 10; 3:8-11; Col. 1:25-27); a truth undiscoverable except by revelation, long hid, now made manifest. The resurrection of the dead (1 Cor. 15:51), and other doctrines which need to be explained but which cannot be fully understood by finite intelligence (Matt. 13:11; Rom. 11:25; 1 Cor. 13:2); the union between Christ and his people symbolized by the marriage union (Eph. 5:31, 32; comp. 6:19); the seven stars and the seven candlesticks (Rev. 1:20); and the woman clothed in scarlet”
  5. I Timothy “I Timothy 3:16 (Geneva1599) — And without controuersie, great is the mysterie of godlinesse, which is, God is manifested in the flesh, iustified in the Spirit, seene of Angels, preached vnto the Gentiles, beleeued on in the world, and receiued vp in glorie.”
  6. Torrey's Topical Textbook “Torrey's Topical Textbook: Darkness — Created by God -- Ps 104:20; Isa 45:7. Originally covered the earth -- Ge 1:2. Separated from the light -- Ge 1:4. Called night -- Ge 1:5. Caused by the setting of the sun -- Ge 15:17; Joh 6:17. Inexplicable nature of -- Job 38:19,20. Exhibits God's power and greatness -- Job 38:8,9. Degrees of, mentioned Great. -- Ge 15:12. That may be felt. -- Ex 10:21. Thick. -- De 5:22; Joe 2:2. Gross. -- Jer 13:16. Outer or extreme. -- Mt 8:12. Effects of Keeps us from seeing objects. -- Ex 10:23. Causes us to go astray. -- Joh 12:35; 1Jo 2:11. Causes us to stumble. -”
  7. Romans “Romans 11:33 (LEB) — Oh, the depth of the riches and the wisdom and the knowledge of God! How unsearchable are his judgments and how incomprehensible are his ways!”
  8. Easton's Bible Dictionary “Easton's Bible Dictionary: Foreknowledge of God — Acts 2:23; Rom. 8:29; 11:2; 1 Pet. 1:2), one of those high attributes essentially appertaining to him the full import of which we cannot comprehend. In the most absolute sense his knowledge is infinite (1 Sam. 23:9-13; Jer. 38:17-23; 42:9-22, Matt. 11:21, 23; Acts 15:18).”
  9. King James Version “[KJV] 1 Timothy 3:16 — And without controversy great is the mystery of godliness: God was manifest in the flesh, justified in the Spirit, seen of angels, preached unto the Gentiles, believed on in the world, received up into glory.”
  10. 1 Timothy (Baptist/Reformed) “John Gill on 1 Timothy 3:16: And without controversy great is the mystery of godliness,.... What follows is so, the incarnation of Christ, his birth of a virgin, the union of the two natures, divine and human, in his person; this is a mystery, which though revealed, and so to be believed, is not to be discerned nor accounted for, nor the modus of it to be comprehended by reason: and it is a great one, next, if not equal, to the doctrine of a trinity of persons in the divine essence; and is a mystery of godliness, which tends to encourage internal and external religion, powerful and practical g”
  11. Colossians (Baptist/Reformed) “John Gill on Colossians 1:26: Even the mystery which hath been hid from ages and generations,.... This is said, as explanative of the word of God; signifying that he did not mean the Scriptures in general, which are the word of God, and every part of them; some part of which is historical, another prophetical, another practical, and another doctrinal; nor the law, which also is the word of God, but the Gospel, called "the mystery", as it often is; because it contains things, which, though revealed, are mysteries to a natural man; and even to enlightened persons, who have the clearest view of t”
  12. Ephesians (Baptist/Reformed) “John Gill on Ephesians 3:3: How that by revelation he made known unto me the mystery,.... Or "is made known unto me": so the Alexandrian copy, and some others, and the Vulgate Latin version. The Gospel, which is sometimes called a mystery, the mystery of the Gospel, the mystery of godliness, and the mystery of faith: the several doctrines of the Gospel are the mysteries of the kingdom of heaven; such as a trinity of persons in the Godhead, the union of the two natures in Christ, the saints' union to Christ, and communion with him, the resurrection of the dead, and the change of living saints, ”
  13. Ephesians (Baptist/Reformed) “John Gill on Ephesians 1:9: Having made known unto us the mystery of his will,.... The Gospel, which is a mystery, a hidden mystery, the mystery of God and of Christ, and the mystery of the Gospel; the several doctrines of it are called the mysteries of the kingdom of heaven; such as are concerning the trinity of persons in the Godhead, the union of the two natures in Christ, his sonship and incarnation, the saints' union and communion with him, the work of the Spirit of God upon the soul, the calling of the Gentiles, and the conversion of the Jews, the resurrection of the dead, and the change”
  14. 2 Thessalonians (Presbyterian) “Jamieson, Fausset & Brown on 2 Thessalonians 2:7: the mystery of iniquity--the counterwork to "the mystery of godliness" (Ti1 3:16). Anti-Christianity latently working, as distinguished from its final open manifestation. "Mystery" in Scripture means, not what remains always a secret, but that which is for a while hidden, but in due time manifested (compare Eph 3:4-5). Satan will resort to a mode of opposition more conformed to the then imminent "appearing" and "presence" of the Saviour, and will anticipate Him with a last effort to maintain the dominion of the world [DE BURGH], just as at His ”
  15. Job (Nonconformist/Puritan) “Matthew Henry on Job 11:7: Zophar here speaks very good things concerning God and his greatness and glory, concerning man and his vanity and folly: these two compared together, and duly considered, will have a powerful influence upon our submission to all the dispensations of the divine Providence. I. See here what God is, and let him be adored. 1. He is an incomprehensible Being, infinite and immense, whose nature and perfections our finite understandings cannot possibly form any adequate conceptions of, and whose counsels and actings we cannot therefore, without the greatest presumption, pas”
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